Dear David,

* David Bremner <david@tethera.net> [2023-07-03 12:34]:
[...]
> The first thing to try is to make a backup of your database with
> 
> notmuch dump > notmuch-db.txt
Thanks! notmuch dump throws the same error, prefixed with
	+inbox +signed -- id:201805
though I am not sure if this id really belongs to the email causing it.
 
> (or whatever you want to call the file).
> 
> If this succeeds then follow the steps below. If not, then _maybe_ there
> is a way to recover your tags etc., but it will require recompiling some
> parts of xapian, so write again.

> 1) install xapian-tools and run
> 
> $ xapian-check ~/.local/share/notmuch/default/xapian
> 
> This is mainly for (my) curiousity, but it may highlight some database
> corruption or if xapian reports no errors that leans more towards a
> notmuch bug.
I ran xapian-check on ~/.notmuch/xapian and include its messages below at the
end of this mail. Everyone please forgive me for pasting 1121 there. :)

> 2)  Move the database out of the way, re-run notmuch new,
> and restore your state using "notmuch restore < notmuch-db.txt"
 
I'd be fine regenerating the entire database without a backup dump even,
I don't think there is anything in there that can't be regernerated, no?

How could I move the existing database out of the way? I have the
following files in notmuch's directory:

~/.notmuch/xapian$ ls -1
	docdata.glass
	flintlock
	iamglass
	position.glass
	postlist.glass
	termlist.glass

Thanks again David!
P

------>

docdata:
blocksize=8K items=161 firstunused=1 revision=1 levels=0 root=0
B-tree checked okay
docdata table structure checked OK

termlist:
blocksize=8K items=267730 firstunused=23171 revision=1 levels=2 root=746
B-tree checked okay
Size of wdf out of range in termlist
termlist_size != # of entries in termlist
doclen != sum(wdf)
termlist table errors found: 3

postlist:
blocksize=8K items=2437844 firstunused=22023 revision=1 levels=2 root=567
B-tree checked okay
document id 63805: length 325 doesn't match 0 in the termlist table
document id 89028: length 404416 doesn't match 359353 in the termlist table
collfreq 29 != sum wdf 25
termfreq 5 != # of entries 1
docid 3536 > last docid 3534
docid 3538 > last docid 3534
collfreq 15055 != sum wdf 15059
First did in this chunk is <= last in prev chunk
termfreq 8544 != # of entries 8555
collfreq 331831 != sum wdf 334753
termfreq 11793 != # of entries 11800
collfreq 24971 != sum wdf 24993
docid 10538 > last docid 10534
collfreq 217566 != sum wdf 217570
termfreq 5 != # of entries 1
collfreq 109 != sum wdf 113
docid 21012 > last docid 20915
docid 21019 > last docid 20915
docid 21117 > last docid 20915
docid 21229 > last docid 20915
docid 21340 > last docid 20915
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termfreq 1 != # of entries 458
collfreq 3 != sum wdf 3243515
lastdid 20915 != last did 5058208
docid 295877 > last docid 295873
lastdid 295873 != last did 295877
docid 323174 > last docid 323170
lastdid 323170 != last did 323174
docid 46977 > last docid 46869
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termfreq 106 != # of entries 107
collfreq 639 != sum wdf 643
collfreq 128641 != sum wdf 128645
First did in this chunk is <= last in prev chunk
termfreq 26171 != # of entries 26209
collfreq 573463 != sum wdf 592306
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docid 20986 > last docid 20983
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termfreq 2418 != # of entries 2698
collfreq 61919 != sum wdf 71256
collfreq 197618 != sum wdf 197622
docid 262032 > last docid 261935
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Failed to unpack wdf
No last chunk for term 'Zreo'
collfreq 179379 != sum wdf 179383
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collfreq 21293 != sum wdf 21301
collfreq 55 != sum wdf 59
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docid 2080 > last docid 2076
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termfreq 5 != # of entries 423
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postlist table errors found: 962

position:
blocksize=8K items=19047625 firstunused=46353 revision=1 levels=2 root=520
B-tree checked okay
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
position table: Junk after position data
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
position table: Junk after position data
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
Position list entry for document 63805 which doesn't exist or has no terms
position table errors found: 129

spelling:
Lazily created, and not yet used.

synonym:
Lazily created, and not yet used.

Total errors found: 1094
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