Olivier Berger <olivier.berger@telecom-sudparis.eu> writes:
>
> I'm using a local dovecot as a mail storage backend, which is in turn
> indexed my botmuch... any particular thing related to dovecot flags
> handling maybe (i.e. deleted tag being passed to dovecot) ?
>

Nope, we rejected synching the T flag to maildirs for exactly this
reason.  I wonder if you have multiple excluded tags on these messages
somehow.  If you run "notmuch search --exclude=false tag:deleted" do you
get some output? If so, what tags do these messages have?

d